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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58917239_58917688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58917239 - 58917688

Intron Length:

450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

GTCTCATAGAGC

Flanking Amino Acid:

ENFNIKNVVRMLVNENEVKQ

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

0.65

0.7

25.1

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

43.8

-0.5

2.2

55.36

43.2

Associated Gene:

Gene:

DAAM1

Ensembl Gene ID:

ENSAPLG00000013283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022235

58852098 - 58937695

85598

ENSAPLT00000013897

58865469 - 58937695

72227

ENSAPLT00000041843

58852098 - 58937695

85598