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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58917748_58918090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58917748 - 58918090

Intron Length:

343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

GGGACTATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAA

U12 Branch Point Sequence:

CTTTTGGGGACT

Flanking Amino Acid:

WKEQAEKMRKEHSELQQKLE

Intron Amino Acid Position:

458

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

32.9

Major BPS

0.57

1.2

77.7

37.1

Major PPT

64.6

0.33

1.1

Minor 5ss

32.6

-2

3.4

45.9

49.3

Minor BPS

41.2

-0.6

2.6

66.67

44.6

Associated Gene:

Gene:

DAAM1

Ensembl Gene ID:

ENSAPLG00000013283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041843

58852098 - 58937695

85598

ENSAPLT00000022235

58852098 - 58937695

85598

ENSAPLT00000013897

58865469 - 58937695

72227