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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58918877_58919006_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58918877 - 58919006

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

CGCTGTCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAA

U12 Branch Point Sequence:

GGCACCCCAACC

Flanking Amino Acid:

KSFNWSKLPENKLAGTVWTD

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

68.8

43.8

Major BPS

46.7

-0.2

1.2

52.4

Major PPT

76.6

0.6

0.9

72.6

37.7

Minor 5ss

37.2

-1.4

46.7

48.6

Minor BPS

-0.3

1.9

54.33

42.7

Associated Gene:

Gene:

DAAM1

Ensembl Gene ID:

ENSAPLG00000013283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041843

58852098 - 58937695

85598

ENSAPLT00000022235

58852098 - 58937695

85598

ENSAPLT00000013897

58865469 - 58937695

72227