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Intron Name: Anas_platyrhynchos_platyrhynchos_5_58935669_58936961_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58935669 - 58936961

Intron Length:

1293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TATTAATGAACT

Flanking Amino Acid:

EDLLAEAKELSLLQTGSENK

Intron Amino Acid Position:

946

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

68.5

36.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

76.3

0.59

71.7

38.2

Minor 5ss

29.6

-2.3

3.5

35.6

42.2

Minor BPS

57.9

0.33

1.9

81.2

39.2

Associated Gene:

Gene:

DAAM1

Ensembl Gene ID:

ENSAPLG00000013283

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041843

58852098 - 58937695

85598

ENSAPLT00000022235

58852098 - 58937695

85598

ENSAPLT00000013897

58865469 - 58937695

72227