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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59039075_59039345_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

59039075 - 59039345

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGTGTTTT

5'SS Class:

major

3'SS Sequence:

GTGTCCCGCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CGCTCCCCATCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

0.9

78.4

31.4

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

0.05

1.1

49.1

39.6

Minor 5ss

46.9

-0.3

2.7

63.2

43.8

Minor BPS

43.2

-0.5

2.1

52.02

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026773

59038857 - 59048448

9592