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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5904485_5910112_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5904485 - 5910112

Intron Length:

5628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

CTCTCTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCAGAA

U12 Branch Point Sequence:

CTCTCTTTTATA

Flanking Amino Acid:

EMYQYSLPRPAYRFSQLPEM

Intron Amino Acid Position:

1262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

71.7

33.7

Major BPS

52.6

0.07

50.3

35.4

Major PPT

83.7

0.76

0.7

79.4

26.3

Minor 5ss

34.2

-1.8

3.2

45.6

43.6

Minor BPS

59.1

0.28

1.6

66.19

40.9

Associated Gene:

Gene:

KIAA1549L

Ensembl Gene ID:

ENSAPLG00000008459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043119

5894635 - 5954320

59686

ENSAPLT00000008784

5894635 - 5954320

59686