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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59061442_59061848_F

Intron Information:

Intron Rank:

142732

Intron Class:

major

Intron Phase:

Intron Coordinates:

59061442 - 59061848

Intron Length:

407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCGTTAG

U12 Branch Point Sequence:

GCCTCGTTAGGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.4

33.4

Major BPS

47.9

-0.1

1.7

45.3

47.5

Major PPT

89.5

0.89

0.7

29.8

Minor 5ss

38.3

-1.3

2.8

51.3

45.1

Minor BPS

43.6

-0.4

2.4

59.91

49.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041983

59061265 - 59064426

3162