Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_59272365_59273169_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59272365 - 59273169

Intron Length:

805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGGAT

U12 Branch Point Sequence:

ATTATGTGGATT

Flanking Amino Acid:

MSTLQDANEMDYDPPSEGQV

Intron Amino Acid Position:

1249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

76.6

33.6

Major BPS

56.3

0.16

1.5

57.1

49.4

Major PPT

84.9

0.78

0.8

84.5

30.4

Minor 5ss

31.7

-2.1

3.1

36.4

Minor BPS

44.7

-0.3

2.1

65.96

38.9

Associated Gene:

Gene:

KIAA0586

Ensembl Gene ID:

ENSAPLG00000007055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007360

59240305 - 59306919

66615