Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_59274727_59275278_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59274727 - 59275278

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGAAA

5'SS Class:

major

3'SS Sequence:

TTCACACATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CCTTTCTGATCT

Flanking Amino Acid:

VHGQEKMKEAGTDIPAAASL

Intron Amino Acid Position:

1070

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.1

67.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

69.8

0.45

63.1

37.5

Minor 5ss

30.3

-2.3

3.3

39.1

46.3

Minor BPS

54.8

0.23

1.8

71.9

45.2

Associated Gene:

Gene:

KIAA0586

Ensembl Gene ID:

ENSAPLG00000007055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007360

59240305 - 59306919

66615