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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59293379_59293770_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
59293379 - 59293770

Intron Length:
392

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTGAGTTCC

5'SS Class:
major

3'SS Sequence:
TTGTTTATGATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
TTGTTTATGATA

Flanking Amino Acid:
SLQRKEKRADEPVGQSAVVQ

Intron Amino Acid Position:
601

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.6
0.7
1
74
30.6

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
72.2
0.5
1
70
40.3

Minor 5ss
38.4
-1.3
2.9
49.6
39.8

Minor BPS
52.5
0.07
1.5
65.79
35

Associated Gene:

Gene:
KIAA0586

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59240305 - 59306919
66615