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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59298758_59300932_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
59298758 - 59300932

Intron Length:
2175

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAAGACA

5'SS Class:
major

3'SS Sequence:
TCTTCTGCTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACACAT

U12 Branch Point Sequence:
GTACACATAACT

Flanking Amino Acid:
LFSSRGPPVPGGGRLLEHIL

Intron Amino Acid Position:
321

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.1
0.64
1
70.8
34.5

Major BPS
69.9
0.49
1
75.2
29.8

Major PPT
78
0.63
0.8
73.5
31.5

Minor 5ss
26.5
-2.7
3
31.6
42.4

Minor BPS
54.1
0.21
1.8
74.1
41.4

Associated Gene:

Gene:
KIAA0586

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59240305 - 59306919
66615