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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59301105_59301697_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
59301105 - 59301697

Intron Length:
593

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATCTATG

5'SS Class:
major

3'SS Sequence:
TCTTCTCTTTTAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTATAAA

U12 Branch Point Sequence:
TTCATTATAAAT

Flanking Amino Acid:
KLQEQQMNIQSHLISSAVNM

Intron Amino Acid Position:
264

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.8
0.61
1.2
74.4
41.9

Major BPS
78.6
0.71
1
78.6
31

Major PPT
86.1
0.81
0.6
85.1
22.4

Minor 5ss
53.5
0.12
2.1
68.3
42.6

Minor BPS
49.6
0.05
1.7
70.28
40.6

Associated Gene:

Gene:
KIAA0586

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59240305 - 59306919
66615