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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59325320_59325705_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59325320 - 59325705

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTATATTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TGTTCTGTATAT

Flanking Amino Acid:

RKRLKKKDREVSHTGASMSS

Intron Amino Acid Position:

1248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

82.3

32.2

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

76.8

0.6

74.2

39.6

Minor 5ss

51.2

0.04

2.5

70.2

40.4

Minor BPS

-0

2.3

73.69

43.2

Associated Gene:

Gene:

ARID4A

Ensembl Gene ID:

ENSAPLG00000006185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006529

59325216 - 59370555

45340