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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59329294_59330513_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59329294 - 59330513

Intron Length:

1220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACATCTG

5'SS Class:

major

3'SS Sequence:

TTTATTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTATT

Flanking Amino Acid:

DSSPLPNGTEDSGSSDSEAD

Intron Amino Acid Position:

715

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

66.2

45.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.5

0.89

0.7

85.1

29.5

Minor 5ss

36.1

-1.6

3.3

49.6

46.6

Minor BPS

69.2

0.69

1.5

86.8

32.8

Associated Gene:

Gene:

ARID4A

Ensembl Gene ID:

ENSAPLG00000006185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006529

59325216 - 59370555

45340