Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_59330710_59330881_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59330710 - 59330881

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAATATTG

5'SS Class:

major

3'SS Sequence:

TGCTCTCCCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TTCACATTAATA

Flanking Amino Acid:

PKRKQKKRTKNKEDSEKDEK

Intron Amino Acid Position:

650

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

68.1

37.8

Major BPS

70.8

0.52

70.6

31.6

Major PPT

0.59

0.8

73.4

31.6

Minor 5ss

43.3

-0.7

3.1

56.8

41.8

Minor BPS

64.4

0.45

1.6

73.33

38.5

Associated Gene:

Gene:

ARID4A

Ensembl Gene ID:

ENSAPLG00000006185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006529

59325216 - 59370555

45340