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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59336600_59338083_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59336600 - 59338083

Intron Length:

1484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTACCTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

CTTTTTCTACCT

Flanking Amino Acid:

ASYNVKTAYRKYLYGFEEYC

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

79.9

0.67

0.7

74.3

29.8

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

51.6

0.13

1.9

75.41

41.9

Associated Gene:

Gene:

ARID4A

Ensembl Gene ID:

ENSAPLG00000006185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006529

59325216 - 59370555

45340