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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59349629_59351276_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59349629 - 59351276

Intron Length:

1648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCGGAT

U12 Branch Point Sequence:

ATGAGGTAAAAA

Flanking Amino Acid:

LPKSESSPKKGLQEASTFLN

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.3

33.9

Major BPS

66.4

0.41

1.4

65.3

43.7

Major PPT

0.79

0.6

81.2

23.9

Minor 5ss

38.9

-1.2

2.9

48.7

47.5

Minor BPS

36.6

-1

2.4

47.27

42.6

Associated Gene:

Gene:

ARID4A

Ensembl Gene ID:

ENSAPLG00000006185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006529

59325216 - 59370555

45340