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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59353351_59355284_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59353351 - 59355284

Intron Length:

1934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGAAACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTTTGCTTAAAA

Flanking Amino Acid:

SEKSDWYPALVVSPSCNDDV

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.5

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

0.52

68.2

42.1

Minor 5ss

34.5

-1.8

3.3

45.9

43.7

Minor BPS

72.1

0.69

1.8

84.76

Associated Gene:

Gene:

ARID4A

Ensembl Gene ID:

ENSAPLG00000006185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006529

59325216 - 59370555

45340