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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59356116_59356209_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59356116 - 59356209

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCATGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TCTTTTTCCATG

Flanking Amino Acid:

KGERHFAESETLDQLPLTNP

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

0.72

78.4

31.2

Major PPT

82.2

0.73

0.8

78.8

28.9

Minor 5ss

30.1

-2.3

3.2

38.9

46.2

Minor BPS

-0.4

1.9

54.05

42.3

Associated Gene:

Gene:

ARID4A

Ensembl Gene ID:

ENSAPLG00000006185

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006529

59325216 - 59370555

45340