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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59426754_59428161_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

59426754 - 59428161

Intron Length:

1408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGCATGGG

5'SS Class:

weak_major

3'SS Sequence:

GATCACAAACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGATCACAAACC

Flanking Amino Acid:

AKESNCTAPAQLSCELVLML

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.4

0.01

1.1

41.6

39.5

Major BPS

84.4

0.85

34.5

Major PPT

51.9

0.04

1.1

42.1

41.6

Minor 5ss

27.1

-2.6

3.3

35.3

42.6

Minor BPS

46.2

-0.3

2.2

62.45

42.1

Associated Gene:

Gene:

ARMH4

Ensembl Gene ID:

ENSAPLG00000000800

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000829

59425632 - 59472599

46968