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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5949096_5949814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5949096 - 5949814

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAGAAT

U12 Branch Point Sequence:

TTTGTCTACACA

Flanking Amino Acid:

LPAYHFQLKTELQFVGQTDN

Intron Amino Acid Position:

582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

32.9

Major BPS

55.1

0.13

1.4

64.3

39.7

Major PPT

0.79

0.8

76.7

37.4

Minor 5ss

32.6

-2

3.4

45.9

49.3

Minor BPS

49.4

-0

2.2

70.02

42.9

Associated Gene:

Gene:

KIAA1549L

Ensembl Gene ID:

ENSAPLG00000008459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008784

5894635 - 5954320

59686

ENSAPLT00000043119

5894635 - 5954320

59686