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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59689496_59689595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59689496 - 59689595

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CATTTCTTATAG

Flanking Amino Acid:

REKSLLVWIIGQKFPKSSEV

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.8

35.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.59

0.9

73.8

36.9

Minor 5ss

35.2

-1.7

2.7

39.5

40.9

Minor BPS

51.5

-0

1.8

57.24

44.2

Associated Gene:

Gene:

AP5M1

Ensembl Gene ID:

ENSAPLG00000001799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024976

59687739 - 59696725

8987

ENSAPLT00000001955

59687739 - 59696725

8987