Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_59697024_59701584_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59697024 - 59701584

Intron Length:

4561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGTGGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GAGTTTTTATTC

Flanking Amino Acid:

MAAAAELFEEPFVADEYIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

60.1

0.23

1.1

54.5

45.2

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

49.8

-0

1.5

55.2

37.6

Associated Gene:

Gene:

EXOC5

Ensembl Gene ID:

ENSAPLG00000002629

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035650

59696997 - 59721989

24993

ENSAPLT00000031528

59696997 - 59722855

25859

ENSAPLT00000002702

59696997 - 59721989

24993