Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_59713208_59713646_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59713208 - 59713646

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTACA

5'SS Class:

major

3'SS Sequence:

CTTTCGCATAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCGCAT

U12 Branch Point Sequence:

TTTCGCATAAAG

Flanking Amino Acid:

YLKNLYDLYTRTTNLSSKLM

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

75.2

Major BPS

0.5

1.4

79.6

35.6

Major PPT

64.2

0.32

1.1

63.8

36.3

Minor 5ss

42.2

-0.9

2.4

52.6

43.9

Minor BPS

48.1

-0.2

2.2

63.5

43.7

Associated Gene:

Gene:

EXOC5

Ensembl Gene ID:

ENSAPLG00000002629

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035650

59696997 - 59721989

24993

ENSAPLT00000031528

59696997 - 59722855

25859

ENSAPLT00000002702

59696997 - 59721989

24993