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Intron Name: Anas_platyrhynchos_platyrhynchos_5_59854286_59864490_F

Intron Information:

Intron Rank:

138670

Intron Class:

major

Intron Phase:

Intron Coordinates:

59854286 - 59864490

Intron Length:

10205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAC

U12 Branch Point Sequence:

TTCTTTTCCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

28.7

Major BPS

55.5

0.14

64.3

32.4

Major PPT

87.3

0.84

0.6

83.5

24.9

Minor 5ss

-1.6

3.3

46.2

49.1

Minor BPS

49.3

-0

1.9

66.33

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018107

59853457 - 59864848

11392