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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5997505_5999148_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5997505 - 5999148

Intron Length:

1644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTGTA

5'SS Class:

major

3'SS Sequence:

TGTATACGGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATTAA

U12 Branch Point Sequence:

TGTTTCTGTATA

Flanking Amino Acid:

FNQQHINFSQVQHFGSGPQE

Intron Amino Acid Position:

994

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

Major BPS

66.7

0.42

58.1

38.5

Major PPT

59.6

0.22

1.2

54.4

44.9

Minor 5ss

42.4

-0.8

3.1

58.1

46.4

Minor BPS

53.5

0.1

1.8

68.42

38.2

Associated Gene:

Gene:

HIPK3

Ensembl Gene ID:

ENSAPLG00000007742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008071

5997028 - 6047079

50052