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Intron Name: Anas_platyrhynchos_platyrhynchos_5_5999277_5999542_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5999277 - 5999542

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TATATCTTGGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TCATTTATATCT

Flanking Amino Acid:

LHLDEQMVNADATCQPLKKG

Intron Amino Acid Position:

951

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

79.2

0.73

75.3

39.4

Major PPT

62.1

0.27

1.2

64.4

41.3

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

0.01

1.8

68.82

42.4

Associated Gene:

Gene:

HIPK3

Ensembl Gene ID:

ENSAPLG00000007742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008071

5997028 - 6047079

50052