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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60006060_60006618_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60006060 - 60006618

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

AATTCCCGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTATTTTAATT

Flanking Amino Acid:

NLYNWTEDYGSFKPSSWEAV

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

73.3

36.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

66.7

0.38

63.6

38.4

Minor 5ss

30.8

-2.2

3.3

41.8

Minor BPS

76.1

0.9

1.1

87.86

31.1

Associated Gene:

Gene:

TMEM260

Ensembl Gene ID:

ENSAPLG00000008287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008614

60004170 - 60027742

23573

ENSAPLT00000008617

60004170 - 60035951

31782