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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60006796_60007741_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60006796 - 60007741

Intron Length:

946

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCATT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTGGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

GGCTTCACAATT

Flanking Amino Acid:

NLHRFLKVNKHKEVFVCIGL

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

75.9

39.9

Major BPS

68.5

0.46

75.3

29.8

Major PPT

89.2

0.88

0.8

88.3

28.9

Minor 5ss

47.5

-0.2

2.9

72.4

Minor BPS

47.2

-0.1

1.8

62.39

41.7

Associated Gene:

Gene:

TMEM260

Ensembl Gene ID:

ENSAPLG00000008287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008614

60004170 - 60027742

23573

ENSAPLT00000008617

60004170 - 60035951

31782