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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60008226_60009222_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60008226 - 60009222

Intron Length:

997

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTTTCTCATCT

Flanking Amino Acid:

LVAAQIWANYSTCDQSTNYI

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

71.9

0.49

75.8

33.1

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

60.1

0.4

1.8

79.56

42.7

Associated Gene:

Gene:

TMEM260

Ensembl Gene ID:

ENSAPLG00000008287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008617

60004170 - 60035951

31782

ENSAPLT00000008614

60004170 - 60027742

23573