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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60009887_60010264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60009887 - 60010264

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGTTGG

5'SS Class:

major

3'SS Sequence:

TTATTTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTATTTTTTATA

Flanking Amino Acid:

ALVACLSAALPRRQQKSSVI

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.4

46.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

87.8

0.85

0.7

84.4

30.4

Minor 5ss

41.5

-0.9

2.8

53.9

43.5

Minor BPS

60.3

0.32

1.5

71.01

35.8

Associated Gene:

Gene:

TMEM260

Ensembl Gene ID:

ENSAPLG00000008287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008617

60004170 - 60035951

31782

ENSAPLT00000008614

60004170 - 60027742

23573