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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6001034_6001980_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6001034 - 6001980

Intron Length:

947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGAATT

5'SS Class:

major

3'SS Sequence:

TTCTGTGTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTGCAT

U12 Branch Point Sequence:

GTTTGCTCACTT

Flanking Amino Acid:

DDLGRTRSLRECKGSLDCEA

Intron Amino Acid Position:

825

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

78.3

36.2

Major BPS

66.2

0.4

1.4

77.4

37.3

Major PPT

67.8

0.4

65.1

41.2

Minor 5ss

40.7

-1

3.1

55.2

42.8

Minor BPS

48.3

-0

2.2

72.73

44.5

Associated Gene:

Gene:

HIPK3

Ensembl Gene ID:

ENSAPLG00000007742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008071

5997028 - 6047079

50052