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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60091790_60097819_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60091790 - 60097819

Intron Length:

6030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

ATGTCTTTACTT

Flanking Amino Acid:

THDKDTDMFQVGRSTESPID

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

74.4

Major BPS

77.3

0.68

81.5

Major PPT

1.1

0.4

13.8

Minor 5ss

32.2

-2

40.3

45.3

Minor BPS

64.6

0.54

1.6

77.6

39.8

Associated Gene:

Gene:

PELI2

Ensembl Gene ID:

ENSAPLG00000008440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028545

60087096 - 60158574

71479

ENSAPLT00000018824

60087096 - 60135840

48745

ENSAPLT00000008759

60087096 - 60238648

151553