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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6009217_6009983_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6009217 - 6009983

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTATGTAAC

5'SS Class:

major

3'SS Sequence:

CTGTTTTTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTGTTTTTAATA

Flanking Amino Acid:

KHLLDFPHSNQVKSCFHIMD

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

68.1

36.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.9

0.58

0.9

73.3

35.9

Minor 5ss

44.3

-0.6

2.5

59.4

39.2

Minor BPS

68.5

0.58

1.2

69.78

37.7

Associated Gene:

Gene:

HIPK3

Ensembl Gene ID:

ENSAPLG00000007742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008071

5997028 - 6047079

50052