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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6013103_6016674_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6013103 - 6016674

Intron Length:

3572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTAGAA

5'SS Class:

major

3'SS Sequence:

TTTCCTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

AGACCTAAATCA

Flanking Amino Acid:

LYPGALEYDQIRYISQTQGL

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

64.1

Major BPS

71.6

0.54

33.1

Major PPT

85.7

0.8

0.6

84.7

Minor 5ss

28.4

-2.5

3.5

37.9

Minor BPS

39.2

-0.8

1.9

45.93

36.6

Associated Gene:

Gene:

HIPK3

Ensembl Gene ID:

ENSAPLG00000007742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008071

5997028 - 6047079

50052