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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60131283_60135743_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60131283 - 60135743

Intron Length:

4461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAATAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

GTTTATTTAAAT

Flanking Amino Acid:

CEKPCCWILARYNGSLPNGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

85.5

24.8

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

0.65

0.8

71.1

39.6

Minor 5ss

31.3

-2.1

2.9

41.5

45.1

Minor BPS

67.5

0.63

1.6

83.3

37.1

Associated Gene:

Gene:

PELI2

Ensembl Gene ID:

ENSAPLG00000008440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018824

60087096 - 60135840

48745