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Intron Name: Anas_platyrhynchos_platyrhynchos_5_6016799_6045985_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6016799 - 6045985

Intron Length:

29187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

CATTCAGTAACC

Flanking Amino Acid:

CSTYLQSRYYRAPEIILGLP

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

81.2

32.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

80.6

0.69

0.9

73.8

40.8

Minor 5ss

35.9

-1.6

3.5

51.5

45.7

Minor BPS

51.7

0.03

2.3

68.72

42.5

Associated Gene:

Gene:

HIPK3

Ensembl Gene ID:

ENSAPLG00000007742

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008071

5997028 - 6047079

50052