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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60233444_60237971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60233444 - 60237971

Intron Length:

4528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTAATGATT

Flanking Amino Acid:

IENSDVRTDSELTDKRLNVA

Intron Amino Acid Position:

1329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

81.7

31.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

91.9

0.94

0.6

84.9

Minor 5ss

33.7

-1.9

3.4

49.9

46.4

Minor BPS

54.2

0.21

1.9

80.75

34.6

Associated Gene:

Gene:

KTN1

Ensembl Gene ID:

ENSAPLG00000012978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037403

60232245 - 60284616

52372

ENSAPLT00000032188

60232245 - 60284616

52372

ENSAPLT00000022970

60232245 - 60284616

52372

ENSAPLT00000013663

60232245 - 60284616

52372

ENSAPLT00000044875

60232245 - 60284616

52372