Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_60254086_60254703_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60254086 - 60254703

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TGTATTGGTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGTAT

U12 Branch Point Sequence:

TGTGTATGTATT

Flanking Amino Acid:

ITSQVKELQTLLKGKENQVK

Intron Amino Acid Position:

877

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

63.7

0.34

1.4

63.7

43.9

Major PPT

70.8

0.47

1.1

64.6

45.7

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

42.5

-0.5

62.05

42.2

Associated Gene:

Gene:

KTN1

Ensembl Gene ID:

ENSAPLG00000012978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022970

60232245 - 60284616

52372

ENSAPLT00000013663

60232245 - 60284616

52372

ENSAPLT00000044875

60232245 - 60284616

52372

ENSAPLT00000037403

60232245 - 60284616

52372

ENSAPLT00000032188

60232245 - 60284616

52372