Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_60258345_60259235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60258345 - 60259235

Intron Length:

891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

CGTTCATTATCT

Flanking Amino Acid:

QVANKEEDLKALHTENSSLR

Intron Amino Acid Position:

776

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

71.9

32.2

Major BPS

65.7

0.39

71.3

30.3

Major PPT

69.3

0.43

34.3

Minor 5ss

38.6

-1.3

3.1

51.6

45.1

Minor BPS

59.5

0.37

1.9

78.05

43.9

Associated Gene:

Gene:

KTN1

Ensembl Gene ID:

ENSAPLG00000012978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032188

60232245 - 60284616

52372

ENSAPLT00000022970

60232245 - 60284616

52372

ENSAPLT00000013663

60232245 - 60284616

52372

ENSAPLT00000044875

60232245 - 60284616

52372

ENSAPLT00000037403

60232245 - 60284616

52372