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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60264573_60265170_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
60264573 - 60265170

Intron Length:
598

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGT|GTGAGCATT

5'SS Class:
major

3'SS Sequence:
CTCATTTGTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
CATTTCTCATTT

Flanking Amino Acid:
ASVLAEELHKVIAEKDKQLK

Intron Amino Acid Position:
607

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.3
0.41
1.1
70.8
41

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
76.6
0.6
0.9
72
37.8

Minor 5ss
41.9
-0.9
3.1
58.5
45.8

Minor BPS
50.3
0.09
1.8
68.67
42.7

Associated Gene:

Gene:
KTN1

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

60232245 - 60284616
52372

60232245 - 60284616
52372

60232245 - 60284616
52372

60232245 - 60284616
52372

60232245 - 60284616
52372