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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60320390_60321046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60320390 - 60321046

Intron Length:

657

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGAATTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTTCCTTTGAAT

Flanking Amino Acid:

HARNAEYNPKRFAAVIMRIR

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

84.2

33.9

Major BPS

74.6

0.61

1.4

34.5

Major PPT

76.5

0.6

0.9

70.6

39.8

Minor 5ss

39.5

-1.2

3.2

58.6

45.9

Minor BPS

70.2

0.72

1.4

85.92

33.5

Associated Gene:

Gene:

TBPL2

Ensembl Gene ID:

ENSAPLG00000006951

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007215

60315772 - 60325095

9324