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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60338337_60338740_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60338337 - 60338740

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGAA

5'SS Class:

strong_major

3'SS Sequence:

CTGGCTGCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTCTTTTAAAA

Flanking Amino Acid:

FPIEEVKTSMRDPADVSSES

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.3

37.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

67.9

0.4

57.8

43.2

Minor 5ss

27.1

-2.6

3.7

36.6

47.9

Minor BPS

62.4

0.39

1.4

69.31

Associated Gene:

Gene:

ATG14

Ensembl Gene ID:

ENSAPLG00000006865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007137

60327652 - 60343948

16297