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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60338971_60339314_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60338971 - 60339314

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TTATTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATGTTTTTATTT

Flanking Amino Acid:

VEEKKTTQGPDMEHNNPAYT

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.5

0.91

0.7

89.1

27.5

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

59.2

0.37

1.5

73.08

38.9

Associated Gene:

Gene:

ATG14

Ensembl Gene ID:

ENSAPLG00000006865

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007137

60327652 - 60343948

16297