Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_60350628_60357730_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60350628 - 60357730

Intron Length:

7103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACGAGGA

5'SS Class:

major

3'SS Sequence:

TTTTTCTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

SSSSTFHQVKRVSGMHLKPY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

57.6

41.9

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

88.3

0.86

0.6

82.1

Minor 5ss

29.2

-2.4

3.5

38.3

46.7

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

FBXO34

Ensembl Gene ID:

ENSAPLG00000026413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027214

60348530 - 60370848

22319

ENSAPLT00000025297

60348013 - 60370848

22836

ENSAPLT00000046399

60348013 - 60359386

11374