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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60393695_60394358_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
60393695 - 60394358

Intron Length:
664

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTACGTAAA

5'SS Class:
major

3'SS Sequence:
ATGTTTGCTTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTCAT

U12 Branch Point Sequence:
TGCTGTGTAATA

Flanking Amino Acid:
RSKENSSVKQKQPTDAASKR

Intron Amino Acid Position:
81

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.3
0.43
1.1
68.1
38.9

Major BPS
87.4
0.93
0.9
87.9
29.5

Major PPT
77.1
0.61
1
74.1
41

Minor 5ss
35.2
-1.7
2.9
38
41

Minor BPS
45.7
-0.3
2.3
58.91
41.9

Associated Gene:

Gene:
DLGAP5

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

60393444 - 60413344
19901