Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_60394568_60395028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60394568 - 60395028

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAGA

5'SS Class:

strong_major

3'SS Sequence:

GGAATGTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

GAGTTGTTAACT

Flanking Amino Acid:

DPVTVKPREKAAPAFSERIT

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.6

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

65.5

0.35

1.1

54.1

49.5

Minor 5ss

32.9

-1.9

2.9

41.2

44.6

Minor BPS

57.3

0.31

2.1

73.37

43.4

Associated Gene:

Gene:

DLGAP5

Ensembl Gene ID:

ENSAPLG00000006300

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006555

60393444 - 60413344

19901