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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60436431_60436902_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60436431 - 60436902

Intron Length:

472

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

TTGACAATGACT

Flanking Amino Acid:

GAPSMPGGPHPYR*

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

24.3

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

86.1

0.81

0.8

81.1

30.9

Minor 5ss

38.7

-1.3

41.5

Minor BPS

49.7

0.06

74.58

41.8

Associated Gene:

Gene:

MAPK1IP1L

Ensembl Gene ID:

ENSAPLG00000006181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026836

60436291 - 60445207

8917

ENSAPLT00000006396

60436291 - 60438148

1858