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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60494658_60494814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60494658 - 60494814

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTTTTGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GTTTGTTTATCT

Flanking Amino Acid:

SSQGRVNPFKVSSNKKDPLV

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

73.8

0.54

69.2

41.8

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

58.6

0.35

80.3

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032314

60489980 - 60498267

8288