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Intron Name: Anas_platyrhynchos_platyrhynchos_5_60523333_60526281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

60523333 - 60526281

Intron Length:

2949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

ATAACTAAAACA

Flanking Amino Acid:

KQVLGLSKLARIVEIYSRRL

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

68.7

0.47

0.9

67.9

Major PPT

84.5

0.78

0.7

77.4

31.3

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

47.1

-0.2

1.9

60.44

39.2

Associated Gene:

Gene:

GCH1

Ensembl Gene ID:

ENSAPLG00000005356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005554

60510000 - 60528090

18091